Pairwise fitting emdb-1430 on emdb-8281 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-8281 by gmfit(PID:10134).





RANK[1] Corr.Coeff:0.753

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-8281)

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Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.753
0.752
0.717
0.710
0.708
0.707
0.705
0.704
0.689
0.678







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8281.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.737852,0.559383,-0.377711 70.133513 center 0,0,0 model #1
move 192.230458,202.305220,229.656360 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8281)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(10134)]