Pairwise fitting emdb-1430 on emdb-8238 by gmfit



Pairwise fitting of target emdb-1430 on reference emdb-8238 by gmfit(PID:4128794).

RANK[1] Corr.Coeff:0.786 [JSmol] [Molmil]
TARGET(emdb-1430)
display:
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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(emdb-8238)
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Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.786 0.769 0.750 0.743 0.741 0.719 0.717 0.712 0.704 0.699

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8238.map.gz", and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.544156,-0.811261,0.213894 116.538208 center 0,0,0 model #1
    move 195.776748,183.003242,158.674585 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8238)] [Download the target GMM(emdb 1430)] [Download gmfit result file(4128794)]