Pairwise fitting emdb-1430 on emdb-6483 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-6483 by gmfit(PID:4190507).





RANK[1] Corr.Coeff:0.778

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-6483)

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Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.778
0.770
0.752
0.745
0.743
0.739
0.728
0.725
0.724
0.719







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6483.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.693416,-0.214377,-0.687907 114.654975 center 0,0,0 model #1
move 204.687968,219.783732,242.903058 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6483)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4190507)]