Pairwise fitting emdb-1430 on emdb-5642 by gmfit



Pairwise fitting of target emdb-1430 on reference emdb-5642 by gmfit(PID:4101590).

RANK[1] Corr.Coeff:0.851 [JSmol] [Molmil]
TARGET(emdb-1430)
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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(emdb-5642)
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Cryo-EM structures of the late-stage assembly intermediates of 50S ribosome subunit from YlqF-deficient Bacillus subtilis strain [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.851 0.700 0.693 0.691 0.687 0.685 0.674 0.664 0.663 0.661

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5642.map.gz", and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.927119,-0.187091,-0.324727 151.053320 center 0,0,0 model #1
    move -1.597767,-13.232738,-20.257834 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5642)] [Download the target GMM(emdb 1430)] [Download gmfit result file(4101590)]