Pairwise fitting emdb-1430 on emdb-5642 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-5642 by gmfit(PID:4120985).





RANK[1] Corr.Coeff:0.851

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-5642)

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Cryo-EM structures of the late-stage assembly intermediates of 50S ribosome subunit from YlqF-deficient Bacillus subtilis strain [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.851
0.700
0.693
0.691
0.687
0.685
0.674
0.664
0.663
0.661







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5642.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.927119,-0.187091,-0.324727 151.053320 center 0,0,0 model #1
move -1.597767,-13.232738,-20.257834 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5642)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4120985)]