Pairwise fitting emdb-1430 on emdb-5362 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-5362 by gmfit(PID:599780).





RANK[1] Corr.Coeff:0.750

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-5362)

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New mRNA-tRNA translocation intermediates revealed by cryoEM: Class 6 (rotated 70S ribosome with A-site and P-site tRNAs) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.750
0.726
0.710
0.707
0.706
0.693
0.687
0.678
0.665
0.651







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5362.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.884463,-0.350168,0.308395 172.360661 center 0,0,0 model #1
move -16.956529,-1.556334,-22.231744 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!