Pairwise fitting emdb-1430 on emdb-3034 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-3034 by gmfit(PID:371115).





RANK[1] Corr.Coeff:0.668

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-3034)

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Structure of the 26S proteasome-Ubp6 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.668
0.651
0.647
0.644
0.633
0.626
0.619
0.619
0.614
0.603







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3034.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.555284,-0.298568,0.776220 143.705248 center 0,0,0 model #1
move 158.582972,273.295501,295.250753 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3034)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(371115)]