Pairwise fitting emdb-1430 on emdb-2373 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-2373 by gmfit(PID:1390581).





RANK[1] Corr.Coeff:0.788

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-2373)

display:



color:


ribosome-RelA complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.788
0.786
0.752
0.751
0.751
0.742
0.731
0.715
0.714
0.701







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2373.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.671985,0.110550,-0.732267 178.644103 center 0,0,0 model #1
move 176.796346,160.838719,201.080817 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2373)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(1390581)]