Pairwise fitting emdb-1430 on emdb-2171 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-2171 by gmfit(PID:665436).





RANK[1] Corr.Coeff:0.295

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-2171)

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color:


Staphylothermus marinus 50S ribosomal subunit [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.295
0.155
0.144
0.081
0.077
0.073
0.067
0.066
0.063
0.059







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2171.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.362038,-0.932163,-0.000452 109.273085 center 0,0,0 model #1
move -43.251417,47.668132,44.960272 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!