Pairwise fitting emdb-1430 on emdb-1657 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-1657 by gmfit(PID:4129996).





RANK[1] Corr.Coeff:0.786

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-1657)

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Structural insight into nascent polypeptide chain-mediated translational stalling [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.786
0.728
0.715
0.714
0.697
0.678
0.673
0.673
0.663
0.663







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1657.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.499885,-0.850261,0.164839 130.909376 center 0,0,0 model #1
move 12.212470,-5.425728,-32.585696 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1657)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4129996)]