Pairwise fitting emdb-1430 on emdb-1657 by gmfit



Pairwise fitting of target emdb-1430 on reference emdb-1657 by gmfit(PID:4114712).

RANK[1] Corr.Coeff:0.786 [JSmol] [Molmil]
TARGET(emdb-1430)
display:
color:
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(emdb-1657)
display:
color:
Structural insight into nascent polypeptide chain-mediated translational stalling [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.786 0.728 0.715 0.714 0.697 0.678 0.673 0.673 0.663 0.663

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1657.map.gz", and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.499885,-0.850261,0.164839 130.909376 center 0,0,0 model #1
    move 12.212470,-5.425728,-32.585696 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1657)] [Download the target GMM(emdb 1430)] [Download gmfit result file(4114712)]