Pairwise fitting emdb-1402 on emdb-5600 by gmfit



Pairwise fitting of target emdb-1402 on reference emdb-5600 by gmfit(PID:4101744).

RANK[1] Corr.Coeff:0.286 [JSmol] [Molmil]
TARGET(emdb-1402)
display:
color:
Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1402)]
REFERENCE(emdb-5600)
display:
color:
Penicillium Chrysogenum Virus (PcV) capsid structure [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.286 0.284 0.283 0.283 0.282 0.280 0.279 0.279 0.278 0.277

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5600.map.gz", and read it.
  2. Download the Target map "emd_1402.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.605768,-0.131691,-0.784667 113.069817 center 0,0,0 model #1
    move -8.561732,-4.451451,-2.265735 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5600)] [Download the target GMM(emdb 1402)] [Download gmfit result file(4101744)]