Pairwise fitting emdb-1402 on emdb-5600 by gmfit










Pairwise fitting of target emdb-1402 on reference emdb-5600 by gmfit(PID:4124171).





RANK[1] Corr.Coeff:0.286

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1402)

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color:



Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1402)]







REFERENCE(emdb-5600)

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Penicillium Chrysogenum Virus (PcV) capsid structure [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.286
0.284
0.283
0.283
0.282
0.280
0.279
0.279
0.278
0.277







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5600.map.gz", and read it.

  2.  Download the Target map "emd_1402.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.605768,-0.131691,-0.784667 113.069817 center 0,0,0 model #1
move -8.561732,-4.451451,-2.265735 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5600)]

[Download the target GMM(emdb 1402)]

[Download gmfit result file(4124171)]