Pairwise fitting emdb-1402 on emdb-1938 by gmfit










Pairwise fitting of target emdb-1402 on reference emdb-1938 by gmfit(PID:1380914).





RANK[1] Corr.Coeff:0.693

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1402)

display:



color:



Cryo-electron microscopy of hepatitis B virions reveals variability in envelope capsid interactions. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1402)]







REFERENCE(emdb-1938)

display:



color:


C42 Rabbit Hemorrhagic Disease Virus (RHDV) capsid [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.693
0.690
0.688
0.687
0.685
0.684
0.682
0.681
0.679
0.679







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1938.map.gz", and read it.

  2.  Download the Target map "emd_1402.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.831989,0.492521,-0.255378 174.721320 center 0,0,0 model #1
move 0.485144,-1.380613,2.051932 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1938)]

[Download the target GMM(emdb 1402)]

[Download gmfit result file(1380914)]