Pairwise fitting emdb-1386 on emdb-1461 by gmfit










Pairwise fitting of target emdb-1386 on reference emdb-1461 by gmfit(PID:456240).





RANK[1] Corr.Coeff:0.455

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1386)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1386)]







REFERENCE(emdb-1461)

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Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.455
0.422
0.407
0.381
0.367
0.355
0.354
0.333
0.316
0.305







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1461.map.gz", and read it.

  2.  Download the Target map "emd_1386.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.420575,-0.254427,0.870852 123.346194 center 0,0,0 model #1
move 13.569888,96.438868,274.460563 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!