Pairwise fitting emdb-1384 on emdb-8075 by gmfit










Pairwise fitting of target emdb-1384 on reference emdb-8075 by gmfit(PID:11001).





RANK[1] Corr.Coeff:0.436

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1384)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1384)]







REFERENCE(emdb-8075)

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Structure of the cellulose synthase complex of Gluconacetobacter hansenii at 23.4 Angstrom resolution [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.436
0.418
0.406
0.402
0.354
0.340
0.200
0.174
0.171
0.171







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8075.map.gz", and read it.

  2.  Download the Target map "emd_1384.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.126834,-0.695600,0.707145 141.054161 center 0,0,0 model #1
move -2.604794,-6.531024,4.163126 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8075)]

[Download the target GMM(emdb 1384)]

[Download gmfit result file(11001)]