Pairwise fitting emdb-1369 on pdb-5mmi by gmfit



Pairwise fitting of target emdb-1369 on reference pdb-5mmi by gmfit(PID:4058970).

RANK[1] Corr.Coeff:0.930 [JSmol] [Molmil]
TARGET(emdb-1369)
display:
color:
Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1369)]
REFERENCE(pdb-5mmi)
display:
color:
b'STRUCTURE OF THE LARGE SUBUNIT OF THE CHLOROPLAST RIBOSOME ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.930 0.786 0.784 0.753 0.745 0.739 0.734 0.730 0.727 0.724

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5mmi"(PDB-format) or "5mmi"(mmCIF-format), and read it.
  2. Download the Target map "emd_1369.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.126423,0.863005,-0.489121 100.076650 center 0,0,0 model #1
    move 221.711433,228.714760,218.459986 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 5mmi)] [Download the target GMM(emdb 1369)] [Download gmfit result file(4058970)]