Pairwise fitting emdb-1369 on pdb-5mmi by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-5mmi by gmfit(PID:9911).





RANK[1] Corr.Coeff:0.930

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

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Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-5mmi)

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b'STRUCTURE OF THE LARGE SUBUNIT OF THE CHLOROPLAST RIBOSOME            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.930
0.786
0.784
0.753
0.745
0.739
0.734
0.730
0.727
0.724







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5mmi"(PDB-format) or 
 "5mmi"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.126423,0.863005,-0.489121 100.076650 center 0,0,0 model #1
move 221.711433,228.714760,218.459986 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5mmi)]

[Download the target GMM(emdb 1369)]

[Download gmfit result file(9911)]