Pairwise fitting emdb-1369 on pdb-4v19 by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-4v19 by gmfit(PID:4128568).





RANK[1] Corr.Coeff:0.792

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

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Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-4v19)

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b'STRUCTURE OF THE LARGE SUBUNIT OF THE MAMMALIAN MITORIBOSOME, PART 1  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.792
0.734
0.732
0.730
0.728
0.717
0.703
0.701
0.700
0.697







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v19"(PDB-format) or 
 "4v19"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.311881,0.581412,-0.751458 90.479113 center 0,0,0 model #1
move 238.058280,226.684700,212.696068 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v19)]

[Download the target GMM(emdb 1369)]

[Download gmfit result file(4128568)]