Pairwise fitting emdb-1369 on pdb-2j28 by gmfit










Pairwise fitting of target emdb-1369 on reference pdb-2j28 by gmfit(PID:36401).





RANK[1] Corr.Coeff:0.907

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1369)

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Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1369)]







REFERENCE(pdb-2j28)

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b'MODEL OF E. COLI SRP BOUND TO 70S RNCS                                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.907
0.787
0.777
0.776
0.763
0.759
0.755
0.733
0.729
0.727







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2j28"(PDB-format) or 
 "2j28"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1369.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.700615,0.713397,-0.014239 179.468659 center 0,0,0 model #1
move 8.500183,1.811888,2.461354 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 2j28)]

[Download the target GMM(emdb 1369)]

[Download gmfit result file(36401)]