Pairwise fitting emdb-1315 on pdb-3j9y by gmfit










Pairwise fitting of target emdb-1315 on reference pdb-3j9y by gmfit(PID:1238194).





RANK[1] Corr.Coeff:0.805

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(pdb-3j9y)

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color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.805
0.797
0.767
0.753
0.736
0.716
0.710
0.706
0.705
0.696







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j9y"(PDB-format) or 
 "3j9y"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.654450,0.753894,-0.057793 158.522825 center 0,0,0 model #1
move 192.314321,180.843890,192.011888 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!