Pairwise fitting emdb-1315 on emdb-8279 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-8279 by gmfit(PID:4116062).





RANK[1] Corr.Coeff:0.802

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-8279)

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color:


Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.802
0.759
0.737
0.719
0.690
0.690
0.687
0.679
0.673
0.666







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8279.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.125293,-0.141121,-0.982032 174.685321 center 0,0,0 model #1
move 193.389582,196.219986,195.039843 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8279)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4116062)]