Pairwise fitting emdb-1315 on emdb-8279 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-8279 by gmfit(PID:4116062).

RANK[1] Corr.Coeff:0.802 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-8279)
display:
color:
Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.802 0.759 0.737 0.719 0.690 0.690 0.687 0.679 0.673 0.666

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8279.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.125293,-0.141121,-0.982032 174.685321 center 0,0,0 model #1
    move 193.389582,196.219986,195.039843 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8279)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4116062)]