Pairwise fitting emdb-1315 on emdb-6397 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-6397 by gmfit(PID:510333).





RANK[1] Corr.Coeff:0.931

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-6397)

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The structure of BipA in GTP form bound to the ratcheted ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.931
0.835
0.744
0.728
0.719
0.694
0.692
0.691
0.690
0.678







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6397.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.985341,-0.153085,-0.075286 3.261773 center 0,0,0 model #1
move 233.097416,234.172231,231.000301 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!