Pairwise fitting emdb-1315 on emdb-5784 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5784 by gmfit(PID:4060417).





RANK[1] Corr.Coeff:0.793

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5784)

display:



color:


EttA-bound E. coli 70S ribosome complex containing P-site tRNA and A-site tRNA [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.793
0.765
0.724
0.709
0.703
0.699
0.694
0.692
0.689
0.667







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5784.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.710450,0.682083,-0.173272 165.411672 center 0,0,0 model #1
move 4.511353,0.815306,-5.176919 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5784)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4060417)]