Pairwise fitting emdb-1315 on emdb-5362 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5362 by gmfit(PID:509200).





RANK[1] Corr.Coeff:0.818

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5362)

display:



color:


New mRNA-tRNA translocation intermediates revealed by cryoEM: Class 6 (rotated 70S ribosome with A-site and P-site tRNAs) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.818
0.754
0.753
0.726
0.725
0.695
0.692
0.687
0.687
0.681







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5362.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.145600,-0.163684,-0.975709 171.874358 center 0,0,0 model #1
move 0.015002,0.121824,0.620783 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!