Pairwise fitting emdb-1315 on emdb-5360 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-5360 by gmfit(PID:4128673).

RANK[1] Corr.Coeff:0.802 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-5360)
display:
color:
New mRNA-tRNA translocation intermediates revealed by cryoEM: Class 3 (unrotated 70S ribosome with P-site tRNA) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.802 0.750 0.741 0.708 0.686 0.683 0.681 0.673 0.673 0.671

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5360.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.112750,-0.135043,-0.984404 178.331463 center 0,0,0 model #1
    move -1.111990,0.073030,-0.255345 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5360)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4128673)]