Pairwise fitting emdb-1315 on emdb-5262 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5262 by gmfit(PID:1387214).





RANK[1] Corr.Coeff:0.761

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5262)

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color:


Intermediate states observed in the pre-translocation ribosome during tRNA translocation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.761
0.737
0.718
0.698
0.692
0.671
0.667
0.661
0.653
0.651







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5262.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.082745,-0.129083,-0.988175 144.842724 center 0,0,0 model #1
move -1.377861,-3.948734,-1.652451 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5262)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(1387214)]