Pairwise fitting emdb-1315 on emdb-5125 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5125 by gmfit(PID:445526).





RANK[1] Corr.Coeff:0.766

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5125)

display:



color:


PSRP1 is not a bona fide ribosomal protein, but a stress response factor [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.766
0.744
0.727
0.725
0.679
0.670
0.661
0.656
0.647
0.646







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5125.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.685490,0.727806,-0.020055 158.653010 center 0,0,0 model #1
move 176.400180,174.587344,174.612663 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!