Pairwise fitting emdb-1315 on emdb-2475 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-2475 by gmfit(PID:4163585).





RANK[1] Corr.Coeff:0.751

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-2475)

display:



color:


Energy barriers and driving forces of tRNA translocation through the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.751
0.706
0.684
0.683
0.682
0.661
0.654
0.645
0.627
0.619







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2475.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.200232,-0.922375,-0.330349 129.023199 center 0,0,0 model #1
move 178.052912,177.878751,187.001972 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2475)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4163585)]