Pairwise fitting emdb-1315 on emdb-2183 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-2183 by gmfit(PID:19969).





RANK[1] Corr.Coeff:0.890

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

display:



color:



Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-2183)

display:



color:


Structural basis for TetM-mediated tetracycline resistance [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.890
0.746
0.732
0.709
0.706
0.693
0.688
0.686
0.682
0.674







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2183.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.847139,-0.388682,0.362328 5.762578 center 0,0,0 model #1
move 3.952099,1.693178,-0.301832 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2183)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(19969)]