Pairwise fitting emdb-1315 on emdb-1850 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1850 by gmfit(PID:4103884).

RANK[1] Corr.Coeff:0.794 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1850)
display:
color:
Near-cognate 70S-TC complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.794 0.758 0.751 0.744 0.699 0.698 0.686 0.683 0.680 0.672

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1850.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.070997,0.046229,-0.996405 132.386820 center 0,0,0 model #1
    move -2.385626,-2.114120,-3.398430 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1850)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4103884)]