Pairwise fitting emdb-1315 on emdb-1716 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1716 by gmfit(PID:4088783).

RANK[1] Corr.Coeff:0.786 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1716)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.786 0.742 0.706 0.698 0.688 0.687 0.671 0.670 0.662 0.659

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1716.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.218263,-0.928817,-0.299434 124.742590 center 0,0,0 model #1
    move 180.518939,180.641541,190.813329 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1716)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4088783)]