Pairwise fitting emdb-1315 on emdb-1716 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-1716 by gmfit(PID:4125166).





RANK[1] Corr.Coeff:0.786

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-1716)

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Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.786
0.742
0.706
0.698
0.688
0.687
0.671
0.670
0.662
0.659







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1716.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.218263,-0.928817,-0.299434 124.742590 center 0,0,0 model #1
move 180.518939,180.641541,190.813329 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1716)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4125166)]