Pairwise fitting emdb-1315 on emdb-1417 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1417 by gmfit(PID:4097353).

RANK[1] Corr.Coeff:0.767 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1417)
display:
color:
Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.767 0.726 0.715 0.657 0.652 0.650 0.647 0.645 0.642 0.635

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1417.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.064300,0.042668,-0.997018 135.439505 center 0,0,0 model #1
    move -1.486937,0.464131,-3.687985 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1417)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4097353)]