Pairwise fitting emdb-1315 on emdb-1417 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-1417 by gmfit(PID:4097353).





RANK[1] Corr.Coeff:0.767

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-1417)

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Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.767
0.726
0.715
0.657
0.652
0.650
0.647
0.645
0.642
0.635







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1417.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.064300,0.042668,-0.997018 135.439505 center 0,0,0 model #1
move -1.486937,0.464131,-3.687985 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1417)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4097353)]