Pairwise fitting emdb-1315 on emdb-1310 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1310 by gmfit(PID:4102411).

RANK[1] Corr.Coeff:0.810 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1310)
display:
color:
Scaffolding as an organizing principle in trans-translation. The roles of small protein B and ribosomal protein S1. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.810 0.747 0.729 0.703 0.694 0.682 0.679 0.678 0.678 0.664

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1310.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.136435,-0.141452,-0.980498 174.843231 center 0,0,0 model #1
    move -2.741874,-1.668755,-1.645764 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1310)] [Download the target GMM(emdb 1315)] [Download gmfit result file(4102411)]