Pairwise fitting emdb-1315 on emdb-1310 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-1310 by gmfit(PID:4102411).





RANK[1] Corr.Coeff:0.810

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-1310)

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Scaffolding as an organizing principle in trans-translation. The roles of small protein B and ribosomal protein S1. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.810
0.747
0.729
0.703
0.694
0.682
0.679
0.678
0.678
0.664







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1310.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.136435,-0.141452,-0.980498 174.843231 center 0,0,0 model #1
move -2.741874,-1.668755,-1.645764 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1310)]

[Download the target GMM(emdb 1315)]

[Download gmfit result file(4102411)]