Pairwise fitting emdb-1311 on emdb-3040 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-3040 by gmfit(PID:246954).





RANK[1] Corr.Coeff:0.770

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-3040)

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Cryo-EM structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ) and the UGA stop codon [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.770
0.766
0.764
0.738
0.725
0.724
0.718
0.716
0.701
0.688







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3040.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.717835,0.696046,-0.015258 164.041377 center 0,0,0 model #1
move 280.593415,288.510080,286.091774 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!