Pairwise fitting emdb-1311 on emdb-2813 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2813 by gmfit(PID:603725).





RANK[1] Corr.Coeff:0.851

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2813)

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Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.851
0.750
0.744
0.743
0.713
0.711
0.700
0.697
0.696
0.677







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2813.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.922392,0.298237,0.245453 14.660266 center 0,0,0 model #1
move -9.017085,-10.771532,-3.645574 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!