Pairwise fitting emdb-1311 on emdb-2696 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2696 by gmfit(PID:363044).





RANK[1] Corr.Coeff:0.654

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2696)

display:



color:


Cryo-EM map of Trigger Factor bound to a translating ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.654
0.591
0.580
0.570
0.570
0.543
0.537
0.529
0.520
0.509







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2696.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.142354,0.100623,0.984688 178.693427 center 0,0,0 model #1
move 5.613358,6.327826,-8.883681 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!