Pairwise fitting emdb-1311 on emdb-2649 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2649 by gmfit(PID:335504).





RANK[1] Corr.Coeff:0.774

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2649)

display:



color:


Structure of the mammalian ribosome-Sec61 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.774
0.751
0.737
0.735
0.732
0.729
0.708
0.705
0.705
0.682







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2649.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.850214,-0.478066,-0.220430 73.988636 center 0,0,0 model #1
move 287.679276,271.309060,272.696775 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!