Pairwise fitting emdb-1311 on emdb-2622 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2622 by gmfit(PID:203446).





RANK[1] Corr.Coeff:0.848

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2622)

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PRE-translocational (classical-2) 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.848
0.763
0.730
0.716
0.714
0.706
0.693
0.690
0.680
0.675







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2622.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.698901,-0.715218,-0.000945 178.242342 center 0,0,0 model #1
move 445.590999,447.682923,464.050698 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!