Pairwise fitting emdb-1311 on emdb-2275 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2275 by gmfit(PID:4130807).





RANK[1] Corr.Coeff:0.773

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2275)

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Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.773
0.739
0.735
0.715
0.714
0.705
0.682
0.682
0.675
0.672







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2275.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.627181,-0.402160,-0.667017 80.483827 center 0,0,0 model #1
move 20.962623,1.852214,-4.048001 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2275)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4130807)]