Pairwise fitting emdb-1311 on emdb-1499 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1499 by gmfit(PID:4169389).





RANK[1] Corr.Coeff:0.768

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1499)

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color:


Structure of the E. coli trigger factor bound to a translating ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.768
0.745
0.711
0.705
0.691
0.657
0.647
0.647
0.640
0.634







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1499.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.070009,-0.102452,0.992271 131.710602 center 0,0,0 model #1
move 418.474042,406.895915,394.531105 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1499)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4169389)]