Pairwise fitting emdb-1311 on emdb-1395 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1395 by gmfit(PID:4100990).





RANK[1] Corr.Coeff:0.888

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1395)

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Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.888
0.875
0.688
0.681
0.671
0.660
0.657
0.627
0.622
0.617







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1395.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.493165,-0.640094,-0.589125 2.396344 center 0,0,0 model #1
move -10.501924,0.086819,-6.469476 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1395)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4100990)]