Pairwise fitting emdb-1311 on emdb-1395 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1395 by gmfit(PID:4100990).

RANK[1] Corr.Coeff:0.888 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1395)
display:
color:
Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.888 0.875 0.688 0.681 0.671 0.660 0.657 0.627 0.622 0.617

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1395.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.493165,-0.640094,-0.589125 2.396344 center 0,0,0 model #1
    move -10.501924,0.086819,-6.469476 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1395)] [Download the target GMM(emdb 1311)] [Download gmfit result file(4100990)]