Pairwise fitting emdb-1311 on emdb-1312 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1312 by gmfit(PID:328764).





RANK[1] Corr.Coeff:0.931

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1312)

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Scaffolding as an organizing principle in trans-translation. The roles of small protein B and ribosomal protein S1. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.931
0.712
0.699
0.693
0.678
0.655
0.648
0.645
0.643
0.637







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1312.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.896746,-0.100041,-0.431090 1.473110 center 0,0,0 model #1
move 0.880838,-1.834206,-1.941052 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!