Pairwise fitting emdb-1311 on emdb-1064 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1064 by gmfit(PID:4095701).

RANK[1] Corr.Coeff:0.693 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1064)
display:
color:
Visualization of release factor 3 on the ribosome during termination of protein synthesis. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.693 0.595 0.584 0.573 0.564 0.562 0.556 0.556 0.550 0.544

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1064.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.607828,-0.516268,0.603335 163.307879 center 0,0,0 model #1
    move 4.235536,-5.109365,5.228534 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1064)] [Download the target GMM(emdb 1311)] [Download gmfit result file(4095701)]