Pairwise fitting emdb-1311 on emdb-1064 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1064 by gmfit(PID:4119852).





RANK[1] Corr.Coeff:0.693

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1064)

display:



color:


Visualization of release factor 3 on the ribosome during termination of protein synthesis. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.693
0.595
0.584
0.573
0.564
0.562
0.556
0.556
0.550
0.544







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1064.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.607828,-0.516268,0.603335 163.307879 center 0,0,0 model #1
move 4.235536,-5.109365,5.228534 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1064)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4119852)]