Pairwise fitting emdb-1311 on emdb-1005 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1005 by gmfit(PID:4090964).





RANK[1] Corr.Coeff:0.687

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1005)

display:



color:


Structure of the Escherichia coli ribosomal termination complex with release factor 2. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.687
0.560
0.516
0.516
0.510
0.509
0.497
0.488
0.488
0.486







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1005.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.617975,-0.499433,0.607185 163.370529 center 0,0,0 model #1
move 5.949207,-4.631616,5.909946 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1005)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4090964)]