Pairwise fitting emdb-1311 on emdb-1004 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1004 by gmfit(PID:596699).





RANK[1] Corr.Coeff:0.763

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1004)

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Ribosome interactions of aminoacyl-tRNA and elongation factor Tu in the codon-recognition complex. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.763
0.605
0.578
0.576
0.574
0.561
0.555
0.548
0.547
0.543







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1004.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.811620,-0.192714,0.551483 128.906806 center 0,0,0 model #1
move 181.887840,170.832326,191.918455 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!