Pairwise fitting emdb-1252 on pdb-3muw by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-3muw by gmfit(PID:376585).





RANK[1] Corr.Coeff:0.522

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-3muw)

display:



color:


b'PSEUDO-ATOMIC STRUCTURE OF THE E2-E1 PROTEIN SHELL IN SINDBIS VIRUS   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.522
0.460
0.457
0.433
0.419
0.405
0.398
0.397
0.394
0.344







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3muw"(PDB-format) or 
 "3muw"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.129586,0.149789,0.980189 78.441901 center 0,0,0 model #1
move 155.767949,-149.055959,65.229669 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!