Pairwise fitting emdb-1252 on pdb-3jc5 by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-3jc5 by gmfit(PID:493500).





RANK[1] Corr.Coeff:0.703

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-3jc5)

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b'STRUCTURE OF THE EUKARYOTIC REPLICATIVE CMG HELICASE AND PUMPJACK     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.703
0.668
0.650
0.615
0.593
0.590
0.575
0.565
0.538
0.489







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3jc5"(PDB-format) or 
 "3jc5"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.812580,0.191006,0.550664 29.168930 center 0,0,0 model #1
move 9.935787,-148.210233,59.914819 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!