Pairwise fitting emdb-1252 on pdb-2xfc by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-2xfc by gmfit(PID:615452).





RANK[1] Corr.Coeff:0.559

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-2xfc)

display:



color:


b'CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SEMLIKI FOREST     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.559
0.514
0.471
0.465
0.440
0.416
0.414
0.412
0.410
0.403







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2xfc"(PDB-format) or 
 "2xfc"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.122353,0.991550,-0.043112 119.480446 center 0,0,0 model #1
move -12.491814,-136.591796,520.931400 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!