Pairwise fitting emdb-1252 on emdb-8440 by gmfit



Pairwise fitting of target emdb-1252 on reference emdb-8440 by gmfit(PID:4101604).

RANK[1] Corr.Coeff:0.646 [JSmol] [Molmil]
TARGET(emdb-1252)
display:
color:
Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1252)]
REFERENCE(emdb-8440)
display:
color:
Structure of bL17-depleted large ribosomal subunit assembly intermediate - Class B [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.646 0.614 0.587 0.581 0.575 0.562 0.548 0.533 0.533 0.515

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8440.map.gz", and read it.
  2. Download the Target map "emd_1252.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.576844,-0.492296,0.651840 31.047780 center 0,0,0 model #1
    move 147.793013,68.008700,-68.165472 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 8440)] [Download the target GMM(emdb 1252)] [Download gmfit result file(4101604)]