Pairwise fitting emdb-1252 on emdb-6086 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-6086 by gmfit(PID:1384305).





RANK[1] Corr.Coeff:0.528

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-6086)

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Single particle cryo-EM reconstruction of ABC transporter TmrAB in complex with a Fab BA6 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.528
0.457
0.451
0.438
0.426
0.425
0.401
0.392
0.330
0.317







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6086.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.248148,-0.309570,-0.917926 132.812394 center 0,0,0 model #1
move 110.059663,180.227230,-217.077245 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6086)]

[Download the target GMM(emdb 1252)]

[Download gmfit result file(1384305)]