Pairwise fitting emdb-1252 on emdb-2469 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-2469 by gmfit(PID:4088827).





RANK[1] Corr.Coeff:0.686

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-2469)

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color:


30S Ribosome Subunit Assembly Intermediates, Intermediate Group 3c [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.686
0.669
0.625
0.611
0.602
0.592
0.587
0.543
0.508
0.489







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2469.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.273655,0.118697,0.954476 97.161468 center 0,0,0 model #1
move 216.213333,-217.975490,-59.284774 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2469)]

[Download the target GMM(emdb 1252)]

[Download gmfit result file(4088827)]