Pairwise fitting emdb-1252 on emdb-2311 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-2311 by gmfit(PID:864422).





RANK[1] Corr.Coeff:0.579

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-2311)

display:



color:


Three-dimensional structure of active, full-length human telomerase. Independently refined open monomer structure, determined by single-particle electron microscopy in negative stain [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.579
0.570
0.475
0.463
0.391
0.385
0.379
0.351
0.345
0.309







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2311.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.586073,-0.701967,-0.404674 103.397620 center 0,0,0 model #1
move 270.169843,247.056704,-129.373299 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2311)]

[Download the target GMM(emdb 1252)]

[Download gmfit result file(864422)]