Pairwise fitting emdb-1252 on emdb-2229 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-2229 by gmfit(PID:1406711).





RANK[1] Corr.Coeff:0.601

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-2229)

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color:


The architecture of human general transcription factor TFIID core complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.601
0.550
0.511
0.505
0.408
0.400
0.344
0.344
0.337
0.334







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2229.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.455961,0.727838,0.512203 98.066190 center 0,0,0 model #1
move 59.168116,-260.337970,150.468303 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!